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IRODS/DATAVERSE  
PROJECT  
  
JUNE    2015
THE	
  ODUM	
  INSTITUTE	
  FOR	
  RESEARCH	
  IN	
  SOCIAL	
  SCIENCE	
  
228	
  DAVIS	
  LIBRARY,	
  CB#	
  3355	
  
UNIVERSITY	
  OF	
  NORTH	
  CAROLINA	
  AT	
  CHAPEL	
  HILL	
  
CHAPEL	
  HILL,	
  NC	
  	
  27599-­‐3355	
  
www.odum.unc.edu	
  
Jonathan	
  Crabtree	
  
Assistant	
  Director	
  of	
  Compu2ng	
  and	
  Archival	
  
Research	
  
Na#onal	
  Science	
  Founda#on	
  Coopera#ve	
  Agreement:	
  OCI-­‐0940841	
  
Hao	
  Xu,	
  Akio	
  Sone,	
  Mike	
  Conway,	
  and	
  Jonathan	
  Crabtree	
  
	
  
In	
  collaboraRon	
  with	
  the	
  
	
  
IQSS	
  Dataverse	
  Team	
  
PROJECT  GOALS
¡  Expand	
  storage	
  opRons	
  for	
  Dataverse	
  
¡  CuraRon	
  workflow	
  integraRon	
  
¡  Connect	
  Dataverse	
  with	
  naRonal	
  architecture	
  
¡  Open	
  source	
  focused	
  
¡  Flexible	
  design	
  
BRINGING  GREAT  TOOLS  TOGETHER
¡  iRODS	
  
¡  Dataverse	
  
¡  Modeshape	
  
¡  Databook	
  Architecture	
  
¡  Apache	
  service	
  mix	
  
¡  iRODS	
  rule	
  integraRon	
  
¡  Indexing	
  engine	
  
THREE  PRIMARY  USE  CASES
¡  Publish	
  research	
  data	
  from	
  within	
  acRve	
  research	
  environment	
  
¡  Expand	
  Dataverse	
  storage	
  opRons	
  	
  
¡  Connect	
  Odum	
  Archive	
  to	
  DFC’s	
  naRonal	
  architecture	
  
DATAVERSE/IRODS INTEGRATION
6
THREE  PRONGED  APPROACH
¡  Enable	
  automated	
  	
  iRODS	
  rules	
  based	
  Dataverse	
  ingest	
  
¡  URlizes	
  Databook	
  and	
  AMQP	
  messaging	
  
¡  Dataverse	
  API	
  
¡  Prototype	
  operaRonal	
  using	
  Dataverse	
  3.x	
  
¡  Use	
  of	
  Modeshape	
  to	
  abstract	
  Dataverse	
  storage	
  
¡  Prototype	
  uses	
  Dataverse	
  3.x	
  and	
  iRODS	
  3.x	
  
¡  iRODS	
  rules	
  based	
  data	
  management	
  
¡  IniRal	
  rules	
  wri]en	
  for	
  subset	
  of	
  ISO	
  16363	
  
¡  Preliminary	
  tests	
  on	
  iRODS	
  3.x	
  
CHALLENGES
¡  MigraRon	
  to	
  Dataverse	
  4.x	
  
¡  MigraRon	
  to	
  iRODS	
  4.x	
  
¡  AuthenRcaRon	
  between	
  two	
  systems	
  
CURRENT  WORK  &  TIMELINE
¡  IQSS	
  team	
  has	
  now	
  programmed	
  a	
  draa	
  of	
  abstract	
  data	
  object	
  for	
  4.0.2	
  
¡  Akio	
  is	
  currently	
  	
  tesRng	
  Modeshape	
  integraRon	
  with	
  Dataverse	
  4.0.2	
  
¡  iRODS	
  4.X	
  integraRon	
  with	
  Modeshape	
  tested	
  	
  
¡  Prototype	
  expected	
  August	
  2015	
  
¡  TesRng	
  for	
  inclusion	
  in	
  Dataverse	
  Fall	
  2015	
  
NEXT  STEPS  AND  FEATURES  NEEDED
¡  SelecRon	
  of	
  iRODS	
  policies	
  from	
  within	
  Dataverse	
  GUI	
  
¡  Dynamic	
  query	
  of	
  Dataverse	
  metadata	
  from	
  within	
  iRODS	
  
¡  Enforce	
  DataTags	
  using	
  iRODS	
  rule	
  based	
  management	
  
¡  Dynamic	
  selecRon	
  of	
  storage	
  locaRons	
  
¡  Remote	
  storage	
  locaRon	
  and	
  linkages	
  
¡  Perform	
  compute	
  on	
  remote	
  data	
  storage	
  
LINKS
¡  https://github.com/DICE-UNC/dfc-dataverse-integration
¡  https://github.com/DICE-UNC/indexing-irods
¡  https://github.com/akio-sone/dvn/tree/Odum-Ext
¡  http://datafed.org
¡  http://thedata.org
¡  http://www.odum.unc.edu/odum/home2.jsp
THANK  YOU
Odum	
  Ins#tute	
  Data	
  Archive	
  
odumarchive@unc.edu	
  
	
  
Jonathan	
  Crabtree	
  
Assistant	
  Director	
  for	
  CompuRng	
  and	
  
Archival	
  Research	
  
Jonathan_Crabtree@unc.edu	
  
	
  
	
  

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iRODS/Dataverse Project by Jonathan Crabtree

  • 1. IRODS/DATAVERSE   PROJECT     JUNE    2015 THE  ODUM  INSTITUTE  FOR  RESEARCH  IN  SOCIAL  SCIENCE   228  DAVIS  LIBRARY,  CB#  3355   UNIVERSITY  OF  NORTH  CAROLINA  AT  CHAPEL  HILL   CHAPEL  HILL,  NC    27599-­‐3355   www.odum.unc.edu   Jonathan  Crabtree   Assistant  Director  of  Compu2ng  and  Archival   Research  
  • 2. Na#onal  Science  Founda#on  Coopera#ve  Agreement:  OCI-­‐0940841   Hao  Xu,  Akio  Sone,  Mike  Conway,  and  Jonathan  Crabtree     In  collaboraRon  with  the     IQSS  Dataverse  Team  
  • 3. PROJECT  GOALS ¡  Expand  storage  opRons  for  Dataverse   ¡  CuraRon  workflow  integraRon   ¡  Connect  Dataverse  with  naRonal  architecture   ¡  Open  source  focused   ¡  Flexible  design  
  • 4. BRINGING  GREAT  TOOLS  TOGETHER ¡  iRODS   ¡  Dataverse   ¡  Modeshape   ¡  Databook  Architecture   ¡  Apache  service  mix   ¡  iRODS  rule  integraRon   ¡  Indexing  engine  
  • 5. THREE  PRIMARY  USE  CASES ¡  Publish  research  data  from  within  acRve  research  environment   ¡  Expand  Dataverse  storage  opRons     ¡  Connect  Odum  Archive  to  DFC’s  naRonal  architecture  
  • 7. THREE  PRONGED  APPROACH ¡  Enable  automated    iRODS  rules  based  Dataverse  ingest   ¡  URlizes  Databook  and  AMQP  messaging   ¡  Dataverse  API   ¡  Prototype  operaRonal  using  Dataverse  3.x   ¡  Use  of  Modeshape  to  abstract  Dataverse  storage   ¡  Prototype  uses  Dataverse  3.x  and  iRODS  3.x   ¡  iRODS  rules  based  data  management   ¡  IniRal  rules  wri]en  for  subset  of  ISO  16363   ¡  Preliminary  tests  on  iRODS  3.x  
  • 8. CHALLENGES ¡  MigraRon  to  Dataverse  4.x   ¡  MigraRon  to  iRODS  4.x   ¡  AuthenRcaRon  between  two  systems  
  • 9. CURRENT  WORK  &  TIMELINE ¡  IQSS  team  has  now  programmed  a  draa  of  abstract  data  object  for  4.0.2   ¡  Akio  is  currently    tesRng  Modeshape  integraRon  with  Dataverse  4.0.2   ¡  iRODS  4.X  integraRon  with  Modeshape  tested     ¡  Prototype  expected  August  2015   ¡  TesRng  for  inclusion  in  Dataverse  Fall  2015  
  • 10. NEXT  STEPS  AND  FEATURES  NEEDED ¡  SelecRon  of  iRODS  policies  from  within  Dataverse  GUI   ¡  Dynamic  query  of  Dataverse  metadata  from  within  iRODS   ¡  Enforce  DataTags  using  iRODS  rule  based  management   ¡  Dynamic  selecRon  of  storage  locaRons   ¡  Remote  storage  locaRon  and  linkages   ¡  Perform  compute  on  remote  data  storage  
  • 11. LINKS ¡  https://github.com/DICE-UNC/dfc-dataverse-integration ¡  https://github.com/DICE-UNC/indexing-irods ¡  https://github.com/akio-sone/dvn/tree/Odum-Ext ¡  http://datafed.org ¡  http://thedata.org ¡  http://www.odum.unc.edu/odum/home2.jsp
  • 12. THANK  YOU Odum  Ins#tute  Data  Archive   odumarchive@unc.edu     Jonathan  Crabtree   Assistant  Director  for  CompuRng  and   Archival  Research   Jonathan_Crabtree@unc.edu