Open Research Gateway for the ELIXIR-GR Infrastructure webinar (06.05.2020)

1. @openaire_eu
TheOpenResearchGateway
fortheELIXIR-GRInfrastructure
AlessiaBardi
OpenAIRE
OpenAIRE ELIXIR-GR Webinar - 6 May 2020

2. OpenAIRE ELIXIR-GR Webinar - 6 May 2020
… practice science in such a way that others can
collaborate and contribute, where research data, lab
notes and other research processes are freely available,
under terms that enable reuse, redistribution and
reproduction of the research and its underlying data and
methods.
Open Science – Open Research
Open research beyond academia
Innovation + Citizen science

3. Open Access
Publications
Open Access
Data
Open
Software
Open
Metodologies
Open
Workflows/ProtocolsOpen Education
Open Peer-ReviewCitizen
Science
Open
Science

4. Research
data
Research
Software
e-infra Tools &
Services
Research
data
Research literature
Articles, docs, white papers
01101010
01100001
11010010
01101010
01100001
11010010
Publishing all
kinds of products
Enabling Reproducibility
(R*)
Fully-fledged
assessment of science
Fully-fledged scientific
reward
Enabling
Monitoring
Bridging RIs and OS
publishing practices
Research Infrastructures Scholarly Communication
Infrastructure
Research process
How - Scholarly Communication transition to Open
Science
OpenAIRE ELIXIR-GR Webinar - 6 May 2020

5. Bridging the worlds
where science is
performed and
science is
published
OpenAIRE ELIXIR-GR Webinar - 6 May 2020

6. Services for all stakeholders
OpenAIRE ELIXIR-GR Webinar - 6 May 2020
Funders, institutions, RIs, initiatives, 3rd parties
Content providers,
Research Infras
Researchers, scientists
Support
Accelerate
Monitor

7. An open metadata research graph of interlinked scientific
products, with access rights information, linked to funding
information and research communities
Open
Complete
De-duplicated
Transparent
Participatory
Decentralized
Trusted
OpenAIRE ELIXIR-GR Webinar - 6 May 2020
Project Community
FunderFunding
Product
Publication
Research
Data
Software
Organization
Source
Other res.
products

8. … and more
Academic Graph
… and more
… and more
… and more European and international funders
… and more
… and more … and more
OpenAIRE ELIXIR-GR Webinar - 6 May 2020

9. Services for all stakeholders
Funders, institutions, RIs, initiatives, 3rd parties
Content providers,
Research Infras
Researchers, scientists
Support
Accelerate
Monitor
OpenAIRE ELIXIR-GR Webinar - 6 May 2020
ContentProviders17.000
Publications110.000.000
(de-duplicated, 10M con full-text)
Projects3.000.000
Datasets10.000.000
Software230.000
Funders29

10. OpenAIREResearchCommunityDashboard:
EnablingOpenSciencepublishingforresearch
communities,initiativesandinfrastructures

11. Motivations
Asauserofaresearch
infrastructure,wherecanIfind
theresultsoftheresearch
activitiesofmypeers?Wherecan
Itellthatmyresearchresults
wereobtainedthankstothe
servicesofmyresearch
infrastructure?
Literature &
Data Deluge
Asaresearcher,howcanIpublish
myresearchproductsaccording
toOpenScienceprinciples?
Open Science
publishing tools
Asamanagerofaresearch
initiative/infrastructure,howcanI
monitortheimpactofmyRIand
providenumbersandproofsto
mycurrentandfuturefunders?
Research impact
OpenAIRE ELIXIR-GR Webinar - 6 May 2020

12. Open Research Gateway
OpenAIRE ELIXIR-GR Webinar - 6 May 2020

13. https://connect.openaire.eu
OpenAIRE ELIXIR-GR Webinar - 6 May 2020

14. The Open Research
Gateway for ELIXIR-GR
OpenAIRE ELIXIR-GR Webinar - 6 May 2020
https://beta.elixir-gr.openaire.eu/

15. A gateway to Open Science
AvirtualenvironmenttoimplementOpenSciencepublishingpractices
Report to funders
Uptake of Open Science
publishing practices
Research Impact
All the research
outcome of ELIXIR-GR
DEPOSIT ANYTHING
… and link them
On demand publishing on services of
Research Infrastructures
Open Research Gateway
A single entry point to ELIXIR-GR research products

16. • Gateway curators provide lists of:
Projects funding ELIXIR-GR
Thematic/Infrastructural data sources (e.g. thematic repositories, journals)
Bio.tools (criteria on authors and other metadata fields are applied)
Zenodo communities
Instructions for the OpenAIRE mining team to implement a full-text mining algorithm
The full-text of Open Access publications is analysed and references to URLs of ELIXIR-GR services and software
tools (e.g. Github links) are mined from the whole full-text, including References sections and footnotes
• Researchers can manually add missing research products via the Link functionality
Also in bulk with a list of DOIs or with an ORCID id
• Another OpenAIRE process includes additional research products by propagation
If an ELIXIR-GR result is supplemented by another research product, then the latter is also added among the
ELIXIR-GR products (e.g. an ELIXIR-GR publication is supplemented by a dataset, then the dataset is an ELIXIR-
GR dataset)
How to identify the subset of products among those
in the OpenAIRE Research Graph
OpenAIRE ELIXIR-GR Webinar - 6 May 2020

17. What can you do with the
ELIXIR-GR
Open Research Gateway?
OpenAIRE ELIXIR-GR Webinar - 6 May 2020

18. OpenAIRE ELIXIR-GR Webinar - 6 May 2020
- Uptake of Open
Science publishing
practices
- Research impact
- Report to funders
- Impact of publications
Search for all the
research products of
your RI
Link related research
products and contribute
for a complete record of
research of your RI
- On demand publishing
workflows via services of
research infrastructures
- Use OpenAIRE API and
build other domain-
specific services
DEPOSIT
ANYTHING

19. Statistics

20. Reporting

21. OpenAIRE’s ”catch-all”
repository
A safe repository hosted by CERN where
you can deposit any types of research
products, link them to funding information
and make them citeable. With a DOI.
DEPOSIT ANYTHING
but you can also search for journals and repositories in the OpenAIRE network

24. OpenAIRE APIs to build on top
of the Research Graph
Zenodo REST API to enhance RI services for
semi-automatic deposition and automatically add
research results to the gateway
https://developers.zenodo.org/
http://develop.openaire.eu/
RI sources can contribute to the OpenAIRE Research
Graph using the OpenAIRE Content Provider Dashboard
and embracing the interoperability guidelines
http://provide.openaire.eu/

25. Coming soon

26. Impact of
publications
Popularity and influence

27. The EG-CI Cloud infrastructure
A Cloud Infrastructure (beta version) to
support the on-demand execution of
bioinformatic, container-based workflows
produced by the ELIXIR-GR community
How to bridge to the scholarly communication
infrastructure?
• Publication on Zenodo upon user’s request,
with automatic generation of metadata and
provenance of results

28. • Customization of layout and colors
• Re-design of the “Deposit” page
• More content customizable by gateway curators
To better guide ELIXIR-GR researchers towards Open
Science best practices

29. Questions?
OpenAIRE ELIXIR-GR Webinar - 6 May 2020
The team behind the ELIXIR-GR gateway:
• Thanasis Vergoulis & Serafeim Chatzopoulos (ARC) – curators
• Alessia Bardi (CNR-ISTI) – Product manager
• Argiro Kokogiannaki (ARC) – GUI developer
• Miriam Baglioni (CNR-ISTI) – Back-end developer
• Pedro Principe & André Vieira (UMinho) – Support and training
• Harry Dimitropoulos (ARC) – Full-text mining

30. Break out
groups
https://beta.elixir-gr.openaire.eu/
OpenAIRE ELIXIR-GR Webinar - 6 May 2020